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title	Follow-up call Aug 12Oct 14th, 2024

OpenMRS patient and Lab test order is synced in OpenELIS

Screen Recording 2024-08-05 at 10.20.53 AM.mov

Results from OpenELIS are synced in OpenMRS

Screen Recording 2024-08-12 at 11.16.16 AM.mov

Modification of lab order cancels the existing lab order in OpenELIS and creates a new lab order

Screen Recording 2024-08-12 at 11.30.42 AM.mov

Discontinue lab order in OpenMRS cancels the Incoming Order in OpenELIS

Screen Recording 2024-08-12 at 12.09.02 PM.mov

Call cancelled, low attendance

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title	Follow-up call Oct 7th, 2024

Wei (UCL), Siddharth, Romain, Eudson, Michael

Orthanc integration
- Flows:
  - Order made in OpenMRS (radiology order planned in next 2 months) to be sent to Orthanc
  - Periodic sync from Orthanc to OpenMRS
  - Orthanc ID to be added to OpenMRS for mapping
- Questions:
  - How to map/merge patients coming from Orthanc to OpenMRS ID? → For now, direct 1:1 mapping between the 2 systems (No CR)
  - SSO for login and privilege integration - Orthanc authentication Documentation and repo
- Priority:
  - Link to patient/study in Orthanc in OpenMRS patient file
  - Later on, we can imagine a preview or iframe in OpenMRS with imagery
- Next:
  - Add EIP-OpenMRS-Orthanc routes in Ozone repo (new repo created: https://github.com/ozone-his/eip-openmrs-orthanc/tree/main )

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title	Follow-up call Sep 30, 2024

Wei (UCL), Siddharth, Romain, Eudson, Michael

Orthanc integration
- Flows:
  - Order made in OpenMRS (radiology order planned in next 2 months) to be sent to Orthanc
  - Periodic sync from Orthanc to OpenMRS
  - Orthanc ID to be added to OpenMRS for mapping
- Questions:
  - How to map/merge patients coming from Orthanc to OpenMRS ID? → For now, direct 1:1 mapping between the 2 systems (No CR)
  - SSO for login and privilege integration - Orthanc authentication Documentation and repo
- Priority:
  - Link to patient/study in Orthanc in OpenMRS patient file
  - Later on, we can imagine a preview or iframe in OpenMRS with imagery
- Next:
  - Add EIP-OpenMRS-Orthanc routes in Ozone repo (new repo created: https://github.com/ozone-his/eip-openmrs-orthanc/tree/main )
Deployment of dev-his.openmrs.org
- Done, needs to fix the app switcher config. Fixing in progress.
- Update on the README to point to direct access to apps by URL.
- Next:
  - Enable SSO.
  - Enable Ozone Analytics
Stock & Price visible in O3 upon ordering.
- openmrs-module-fhirproxy is now done.
- fhir-odoo API is now done.
- Need to implement the FHIR endpoints in Billing & Inventory OpenMRS modules. Amos Laboso to reach out to Mekom regarding coding those FHIR endpoints.
- UI implementation is happening ( Usama Idriss Kakumba assigned to
  Jira Legacy
  server System Jira
  serverId dd5f38d5-f8f4-3f41-9551-b59f4841491c
  key O3-4009
  ).
- Testing currently in progress: finding some issues: initial development of OpenMRS module FHIR proxy done against 2.4.x and appears not compatible with 2.6.x, currently being looked at.

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title	Follow-up call Sep 23, 2024

LIMS integration
- SENAITE enabled as the default LIMS option in OpenMRS distro HIS
- OEG integration still halted. Progress pushed to and documented on https://github.com/ozone-his/eip-openelis-openmrs
Deployment of dev-his.openmrs.org
- Done, needs to fix the app switcher config.
  - Emmanuel Nyachoke to fix it this week.
- Demoed at the conference multiple times.
Stock & Price visible in O3 upon ordering.
- openmrs-module-fhirproxy is now done.
- fhir-odoo API is now done.
- Need to implement the FHIR endpoints in Billing & Inventory OpenMRS modules. Amos Laboso to reach out to Mekom regarding coding those FHIR endpoints.
- UI implementation is happening ( Usama Idriss Kakumba assigned to
  Jira Legacy
  server System Jira
  serverId dd5f38d5-f8f4-3f41-9551-b59f4841491c
  key O3-4009
  ).
Ozone Analytics
- Ozone Analytics is now open source: https://github.com/ozone-his/ozone-analytics

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title	Follow-up call Sep 2, 2024

LIMS integration
- OEG integration work is halted until the missing features are implemented.
- Will touch base weekly to assess the progress and resume work when a number of the features are fixed.
- Enable SENAITE as the default LIMS option currently in progress (PR in review and a bug reported)
  Jira Legacy
  server System Jira
  serverId dd5f38d5-f8f4-3f41-9551-b59f4841491c
  key HIS-15
Deployment of dev-his.openmrs.org
- Work necessary in Ozone to build bundled Docker images is now done and currently being deployed (on the Ozone side).
- Deployment of OpenMRS Distro HIS should be done through a Bamboo job - done by today or tomorrow.
FHIR API for Odoo
- Proposed architecture: https://miro.com/app/board/uXjVKv4-SII=/?share_link_id=473611286361
Image Added
- Work has started.
  - Odoo Java Client: we will be using the Odoo Java API project as a Java client for Odoo XML RPC API → https://mekomsolutions.atlassian.net/browse/OZ-688 is not necessary anymore.
  - OpenMRS module FHIR Proxy work is started. Will get more updates after the Ozone internal call.
  - HAPI FHIR server work started today. Will get more updates after the Ozone internal call.
MambaETL
Ozone Analytics
- Open sourcing of Ozone Analytics will be started by Kakumirizi Daud this week.

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title	Follow-up call Aug 26, 2024

LIMS integration
- OEG integration work is halted until the missing features are implemented.
- Will touch base weekly to assess the progress and resume work when a number of the features are fixed.
- Will enable SENAITE as the default LIMS option for now.
  Jira Legacy
  server System Jira
  serverId dd5f38d5-f8f4-3f41-9551-b59f4841491c
  key HIS-15
Deployment of dev-his.openmrs.org
- Delayed few days: init. estimate on end of last week. Looking at mid this week now. (technical work is done so that child distributions can build those Docker-embedded images).
- Unable to reach out to Rafal. Scott has not answered regarding if a Bamboo job already exists or not.
FHIR API for Odoo
- Proposed architecture: https://miro.com/app/board/uXjVKv4-SII=/?share_link_id=473611286361
- Image Added
- Work has started.
MambaETL
- Technical architecture call on Thursday
  - Simplicity of deployment (OMODs and/or SQL script)
  - Ability to dynamically flatten encounters and transpose questions as columns
  - Concerns over:
    - Change Data Capture done through monitoring some specific database fields (date_changed, date_voided…) instead of default mechanisms (binlog…)
    - Performance concerns (due to a lot of indexing) for 10M records databases.
    - Little to no testing.
Ozone Analytics
- Open sourcing of Ozone Analytics will be started by Kakumirizi Daud this week.

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title	Follow-up call Aug 19, 2024

OEG integration
- Project updates shared by Suruchi: integration work is being delayed (+1 week already) by low responsiveness from OEG devs. Attempting to setup weekly calls.
- Eudson advises to not implement any workaround and rather wait for OEG folks to answer.
Deployment of dev-his.openmrs.org
- Development work needed to deploy embedded distro Docker images is well advanced. Est. done by mid-week.
- Then reaching out to Rafal in OpenMRS community to deploy via Bamboo.
- Q: Emmanuel Nyachoke where to deploy the OpenMRS Distro HIS-embedded Docker images?
FHIR API for ERPNext (or Odoo)
- From Slack message Odoo might be a better fit for the default ERP system in Ozone and OpenMRS distro HIS.
- Work needed to have ERPNext expose a FHIR API still needs to be documented as an example. Current work could be pushed and documented so to be picked up and resumed by other group.
- ChargeItemDefinition and InventoryItem exposed in Billing & Pharmacy modules needs to start. Mekom will provide guidance. Need to use the https://github.com/ozone-his/fhir-structures-backport-r4/ library.
MambaETL + Oz Analytics
- Plan a call this week between UCSF and Mekom to look at Mamba ETL in terms of incremental updates.
DHIS2 / DHIS Tracker integration:
- Integration with Tracker. Advises to look at the Ethiori REDCap integration.
- Integration DHIS2 (analytics). Advises to look at the Ozone Analytics when integrated data analytics.

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title	Follow-up call Aug 12, 2024

OEG integration:

OpenMRS patient and Lab test order is synced in OpenELIS
Screen Recording 2024-08-05 at 10.20.53 AM.mov
Results from OpenELIS are synced in OpenMRS
Screen Recording 2024-08-12 at 11.16.16 AM.mov
Modification of lab order cancels the existing lab order in OpenELIS and creates a new lab order
Screen Recording 2024-08-12 at 11.30.42 AM.mov
Discontinue lab order in OpenMRS cancels the Incoming Order in OpenELIS
Screen Recording 2024-08-12 at 12.09.02 PM.mov

Deployment of dev-his.openmrs.org.

In progress: 2 PRs:
- https://github.com/ozone-his/ozone/pull/83/files
- https://github.com/ozone-his/ozone-docker-embedded/blob/main/docker/docker-compose-embedded.yaml.template
Work halted this week due to vacations. Will resume next week.

FHIR API for ERPNext:

Architecture still in progress. Leaning towards running HAPI FHIR to transform and expose FHIR objects from the ERPNext database.
- Architecture will be defined this week and implementation started the week after.

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title	Follow-up call Jul 29, 2024

Analytics in OpenMRS Distro HIS: Ozone Analytics + Mamba ETL
- 3 tickets to be worked on:
  - Jira Legacy
    server System Jira
    serverId dd5f38d5-f8f4-3f41-9551-b59f4841491c
    key HIS-11
  - Jira Legacy
    server System Jira
    serverId dd5f38d5-f8f4-3f41-9551-b59f4841491c
    key HIS-10
  - Jira Legacy
    server System Jira
    serverId dd5f38d5-f8f4-3f41-9551-b59f4841491c
    key HIS-9
- Planned a demo session of Mamba ETL w/ support of incremental changes lead by UCSF. (to be scheduled to next week)
OEG integration in progress:
- Notion board: https://www.notion.so/mekom/OpenMRS-disto-HIS-integrated-with-OpenELIS-Global-597eea5b1d6e4305b0dc472b9682d505?pvs=4
- Automated configuration w/ OEG only supported w/ Liquibase.
- Unblocked to create Patients visible in new UI.
- Mid-next week first delivery. Identify exactly what will be demoed by this time. suruchi dhungana to update.
Deployment of dev-his.openmrs.org server:
- Will be looked at tomorrow.
FHIR specs for ERP Processes completed. Link: https://docs.google.com/document/d/1uvJwYCGZg_wnt5eMCFLBIJoWU4CQaUWSKENvHrR-MEg/edit?usp=sharing
- Designs for Price + Stock upon ordering will be added in Zeplin today.
  - Need some architecture call with Wyclif regarding exposing the FHIR API of the ERP (and authenticating to it)
SSO: Should be configurable to be enable enabled by implementers.
Custom systems integration:
- Ethiori being integrated with a custom LIMS. → good progress done in Ethiori hackathon.
- Used as an example to add more integrations.
Enabling SENAITE in OpenMRS distro HIS:
- Stephen Senkomago Musoke starting evaluation of SENAITE integration.
  - Patients are synced
  - Lab orders not tested as unable create orders with admin users. Reached out on the #ozone channel.
  - Mekom reported some issues with the Lab order basket (unable to revise order).
DHIS2 integration by Michael Bontyes . Interested in looking UgandaEMR existing DHIS2 integration.
- MSF scope: Initialize a new OpenMRS instance with DHIS2 patients (w/ DHIS2 ID + demographics)
  - Using OpenFn to send the new patients and data points.
  - Business logic available on GitHub.

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Version	Old Version 25	New Version Current
Changes made by	suruchi dhungana	Romain Buisson
Saved on	Aug 12, 2024	Oct 15, 2024

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